Blog — Bioinformatics
Paper on reproducible bioinformatics pipelines with Guix
9 mai 2018
I’m happy to announce that the bioinformatics group at the Max Delbrück Center that I’m working with has released a preprint of a paper on reproducibility with the…
Back from RSE 2017
11 septembre 2017
Last week, I was in Manchester, UK, to attend the second conference of Research Software Engineers, or RSE 2017 for short. I presented on the topic of…
Announcing Guix-HPC
5 septembre 2017
Today, Inria, the Max Delbrück Center for Molecular Medicine (MDC), and the Utrecht Bioinformatics Center (UBC) are announcing a joint effort to consolidate GNU Guix for reproducible scientific workflows in high-performance…
Back from BOSC 2017
25 juillet 2017
On the 23rd and 24th of July, Pjotr Prins and I visited Prague to attend BOSC 2017 , the 18th annual Bioinformatics Open Source Conference. We combined our…
Back from GBCUW 2016
13 septembre 2016
On the 12th of September, I attended the German Bioinformatics Core Unit Workshop , a satellite workshop on behalf of the German Conference on Bioinformatics (GCB) 2016. I gave…
Guix at OpenBio Codefest 2014
13 juillet 2014
On Wednesday, July 9th, David Thompson gave a brief introduction to GNU Guix at the Open Bioinformatics Codefest 2014 hackathon . The objective of the Codefest…