sailfish 0.10.1 Mapping-based isoform quantification from RNA-Seq reads
Sailfish is a tool for genomic transcript quantification from RNA-seq data. It requires a set of target transcripts (either from a reference or de-novo assembly) to quantify. All you need to run sailfish is a fasta file containing your reference transcripts and a (set of) fasta/fastq file(s) containing your reads.
- Website: https://www.cs.cmu.edu/~ckingsf/software/sailfish/
- License: GPL 3+
- Package source: bioinformatics.scm
- Patches: snippet
- Builds: x86_64-linux, aarch64-linux