fastqc 0.11.5 Quality control tool for high throughput sequence data
FastQC aims to provide a simple way to do some quality control checks on raw sequence data coming from high throughput sequencing pipelines. It provides a modular set of analyses which you can use to give a quick impression of whether your data has any problems of which you should be aware before doing any further analysis.
The main functions of FastQC are:
Import of data from BAM, SAM or FastQ files (any variant);
Providing a quick overview to tell you in which areas there may be problems;
Summary graphs and tables to quickly assess your data;
Export of results to an HTML based permanent report;
Offline operation to allow automated generation of reports without running the interactive application.
- Website: https://www.bioinformatics.babraham.ac.uk/projects/fastqc/
- License: GPL 3+
- Package source: bioinformatics.scm
- Patches: None
- Builds: x86_64-linux, aarch64-linux, powerpc64le-linux, i686-linux, armhf-linux