r-transphylo 1.4.4 Inference of transmission tree from a dated phylogeny
This is a package to infer transmission trees from a dated phylogeny. It includes methods to simulate and analyze outbreaks. The methodology is described in Didelot et al. (2014) and Didelot et al. (2017).
- Website: https://cran.r-project.org/web/packages/TransPhylo/
- License: GPL 2+
- Package source: cran.scm
- Patches: None
- Builds: x86_64-linux, i686-linux, armhf-linux, aarch64-linux, i586-gnu