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pyicoteo 2.0.7 Analyze high-throughput genetic sequencing data

Pyicoteo is a suite of tools for the analysis of high-throughput genetic sequencing data. It works with genomic coordinates. There are currently six different command-line tools:

  1. pyicoregion: for generating exploratory regions automatically;

  2. pyicoenrich: for differential enrichment between two conditions;

  3. pyicoclip: for calling CLIP-Seq peaks without a control;

  4. pyicos: for genomic coordinates manipulation;

  5. pyicoller: for peak calling on punctuated ChIP-Seq;

  6. pyicount: to count how many reads from N experiment files overlap in a region file;

  7. pyicotrocol: to combine operations from pyicoteo.