Packages — R (Page 22 of 58)

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ribodiff 0.2.2

RiboDiff is a statistical tool that detects the protein translational efficiency change from Ribo-Seq (ribosome footprinting) and RNA-Seq data. It uses a generalized linear model to detect genes showing difference in…

ribotaper 1.3.1

Ribotaper is a method for defining translated "open reading frames" (ORFs) using ribosome profiling (ribo-seq) data. This package provides the Ribotaper pipeline. …

rig 1.11

RIG (Random Identity Generator) generates random, yet real-looking, personal data. It is useful if you need to feed a name to a Web site, BBS, or real person, and are too…

rime-data 0.38.20210802

"rime-data" provides the schema data of Rime Input Method Engine. …

rinutils 0.10.0

This package provides C11 / gnu11 utilities C library …

ripgrep 13.0.0

ripgrep is a line-oriented search tool that recursively searches your current directory for a regex pattern while respecting your gitignore rules. …

ripit 3.9.0

RipIT is used to extract audio from CDs. …

ripmime 1.4.0.10-1.a556ffe

ripMIME is a small program to extract the attached files out of a MIME-encoded email package. …

ripperx 2.8.0

RipperX is a GTK program to rip CD audio tracks and encode them to the Ogg, MP3, or FLAC formats. Its goal is to be easy to use, requiring only…

riscv-pk 1.0.0

The RISC-V Proxy Kernel, `pk', is a lightweight application execution environment that can host statically-linked RISC-V ELF binaries. It is designed to support tethered RISC-V implementations with limited I/O capability and…

ristretto 0.12.2

The Ristretto Image Viewer is an application that can be used to view, and scroll through images. It can be used to run a slideshow of images, open images with other…

ritornello 2.0.1

Ritornello is a ChIP-seq peak calling algorithm based on signal processing that can accurately call binding events without the need to do a pair total DNA input or IgG control sample. …

rkdeveloptool 1.3-0.6e92ebc

Rkdeveloptool can read from and write to RockChip devices over USB, such as the Pinebook Pro. …

rkflashtool 5.2-1.8966c4e

Allows flashing of Rockchip based embedded linux devices. The list of currently supported devices is: RK2818, RK2918, RK2928, RK3026, RK3036, RK3066, RK312X, RK3168, RK3188, RK3288, RK3368. …

rkrlv2 0-2.7edcb4e

This package provides the Rakarrack effects as LV2 plugins. The ports are done such that hopefully when Rakarrack gets an active maintainer these will get merged into the original project. …

rlottie 0.2

Rlottie is a platform independent standalone c++ library for rendering vector based animations and art in realtime. …

rlwrap 0.45.2

Rlwrap is a 'readline wrapper', a small utility that uses the GNU readline library to allow the editing of keyboard input for any command. You should consider rlwrap especially when you…

rmath-standalone 4.1.3

This package provides the R math library as an independent package. …

rmlint 2.10.1

`rmlint' finds space waste and other broken things on your file system and offers to remove it. `rmlint' can find: * duplicate files and duplicate directories, …

rng-tools 6.14

Monitor a hardware random number generator, and supply entropy from that to the system kernel's `/dev/random' machinery. …

rnnoise 0.91

The plugin is meant to suppress a wide range of noise origins: computer fans, office, crowd, airplane, car, train, construction. Mild background noise is always suppressed, loud sounds, like clicking of mechanical keyboard,…

rnp 0.13.1-0.203224f

Set of OpenPGP (RFC4880) tools that works on Linux, *BSD and macOS as a replacement of GnuPG. It is maintained by Ribose after being forked from NetPGP, itself originally written for…

roary 3.12.0

Roary is a high speed stand alone pan genome pipeline, which takes annotated assemblies in GFF3 format (produced by the Prokka program) and calculates the pan genome. Using a standard desktop…

robin-map 0.6.3

The robin-map library is a C++ implementation of a fast hash map and hash set using open-addressing and linear robin hood hashing with backward shift deletion to resolve collisions. Four classes are provided:…

robocut 1.0.11

Robocut is a simple graphical program that allows you to cut graphics with Graphtec and Sihouette plotting cutters using an SVG file as its input. …

robotfindskitten 2.8284271.702

You are a robot moving around in a realm filled with ASCII characters. Examine humourously described though useless items as you search for a kitten among them. The theme of…

rocclr 4.3.0

ROCclr is a virtual device interface that compute runtimes interact with to different backends such as ROCr or PAL. This abstraction allows runtimes to work on Windows as well as on…

rocksdb 6.26.1

RocksDB is a library that forms the core building block for a fast key-value server, especially suited for storing data on flash drives. It has a "Log-Structured-Merge-Database" (LSM) design with flexible…

rocm-bandwidth-test 4.3.0

RocBandwidthTest is designed to capture the performance characteristics of buffer copying and kernel read/write operations. The help screen of the benchmark shows various options one can use in initiating cop/read/writer operations. …

rocm-cmake 4.3.0

ROCm cmake modules provides cmake modules for common build tasks needed for the ROCM software stack. …

rocm-comgr 4.3.0

The Comgr library provides APIs for compiling and inspecting AMDGPU code objects. …

rocm-device-libs 4.3.0

AMD-specific device-side language runtime libraries, namely oclc, ocml, ockl, opencl, hip and hc. …

rocm-opencl-runtime 4.3.0

OpenCL 2.0 compatible language runtime, supporting offline and in-process/in-memory compilation. …

rocminfo 4.3.0

List HSA (Heterogeneous System Architecture) Agents available to ROCm and show their properties. …

rocr-runtime 4.3.0

User-mode API interfaces and libraries necessary for host applications to launch compute kernels to available HSA ROCm kernel agents. …

roct-thunk-interface 4.3.0

User-mode API interfaces used to interact with the ROCk driver. …

roffit 0.12-1.b59e6c855

Roffit is a program that reads an nroff file and outputs an HTML file. It is typically used to display man pages on a web site. …

rofi 1.7.3

Rofi is a minimalist application launcher. It memorizes which applications you regularly use and also allows you to search for an application by name. …

rofi-calc 2.1.0

`rofi-calc' is a rofi plugin that uses qalculate's `qalc' to parse natural language input and provide results. …

rofi-pass 2.0.2

Rofi-pass provides a way to manipulate information stored using password-store through rofi interface: 1. open URLs of entries with hotkey; 2. type any field from entry; 3. auto-typing…

roguebox-adventures 3.0.1

RogueBox Adventures is a graphical roguelike with strong influences from sandbox games like Minecraft or Terraria. The main idea of RogueBox Adventures is to offer the player a kind of roguelike…

ronn 0.7.3

Ronn builds manuals. It converts simple, human readable textfiles to roff for terminal display, and also to HTML for the web. …

ronn-ng 0.9.1

Ronn-NG is an updated fork of ronn. It builds manuals in HTML and Unix man page format from Markdown. …

ropgadget 6.6

This tool lets you search for ROP (Return Oriented Programming) gadgets in binaries. Some facilities are included for automatically generating chains of gadgets to execute system calls. …

rosegarden 21.12

Rosegarden is a music composition and editing environment based around a MIDI sequencer that features a rich understanding of music notation and includes basic support for digital audio. …

rottlog 0.72.2

GNU Rot[t]log is a program for managing log files. It is used to automatically rotate out log files when they have reached a given size or according to a given schedule.…

routino 3.3.3

Routino is an application for finding a route between two points using the dataset of topographical information collected by `https://www.OpenStreetMap.org'. …

rpcbind 1.2.6

`Rpcbind' is a server that converts RPC program numbers into universal addresses. …

rpcsvc-proto 1.4

This package provides `rpcsvc' `protocol.x' files and headers that are not included with the `libtirpc' package. Additionally it contains `rpcgen', which is used to produce header files and sources from the…

rpm 4.17.0

The RPM Package Manager (RPM) is a command-line driven package management system capable of installing, uninstalling, verifying, querying, and updating computer software packages. Each software package consists of an archive of…

rr 5.5.0

rr is a lightweight tool for recording, replaying and debugging execution of applications (trees of processes and threads). Debugging extends GDB with very efficient reverse-execution, which in combination with standard GDB/x86…

rrdtool 1.7.2

The Round Robin Database Tool (RRDtool) is a system to store and display time-series data (e.g. network bandwidth, machine-room temperature, server load average). It stores the data in Round Robin…

rsem 1.3.3

RSEM is a software package for estimating gene and isoform expression levels from RNA-Seq data. The RSEM package provides a user-friendly interface, supports threads for parallel computation of the EM algorithm,…

rseqc 3.0.1

RSeQC provides a number of modules that can comprehensively evaluate high throughput sequence data, especially RNA-seq data. Some basic modules inspect sequence quality, nucleotide composition bias, PCR bias and GC bias,…

rsibreak 0.12.14

Repetitive Strain Injury is an illness which can occur as a result of working with a mouse and keyboard. This utility can be used to remind you to take a break…

rsnapshot 1.4.4

rsnapshot is a file system snapshot utility based on rsync. rsnapshot makes it easy to make periodic snapshots of local machines, and remote machines over SSH. To reduce the disk space…

rsound 1.1

RSound allows you to send audio from an application and transfer it directly to a different computer on your LAN network. It is an audio daemon with a much different focus…

rspamd 2.7

Rspamd is an advanced spam filtering system that allows evaluation of messages by a number of rules including regular expressions, statistical analysis and custom services such as URL black lists. Each…

rss-bridge 2020-11-10

rss-bridge generates Atom feeds for social networking websites lacking feeds. Supported websites include Facebook, Twitter, Instagram and YouTube. …

rss2email 3.13.1

The RSS2email program (`r2e') fetches RSS/Atom news feeds, converts them into emails, and sends them. …

rsync 3.2.3

Rsync is a fast and versatile file copying tool. It can copy locally, to/from another host over any remote shell, or to/from a remote rsync daemon. Its delta-transfer algorithm reduces…

rsyslog 8.2112.0

Rsyslog offers high-performance, great security features and a modular design. While it started as a regular syslogd, rsyslog has evolved into a kind of swiss army knife of logging, being able to…

rtags 2.18

RTags is a client/server application that indexes C/C++ code and keeps a persistent file-based database of references, declarations, definitions, symbolnames etc. There’s also limited support for ObjC/ObjC++. It allows you to…

rtaudio 5.1.0

RtAudio is a set of C++ classes that provides a common API for real-time audio input/output. It was designed with the following objectives: * object-oriented C++ design …

rtl-433 21.12

This is a generic data receiver, mainly for decoding radio transmissions from devices on the 433 MHz, 868 MHz, 315 MHz, 345 MHz and 915 MHz ISM bands. …

rtl-sdr 0.6.0-1.5e73f90

DVB-T dongles based on the Realtek RTL2832U can be used as a cheap software defined radio, since the chip allows transferring the raw I/Q samples to the host. `rtl-sdr' provides drivers…

rtl8812au-aircrack-ng-linux-module 5.6.4.2-7.37e27f9

This is Realtek's rtl8812au Linux driver for USB 802.11n wireless network adapters, modified by the aircrack-ng project to support monitor mode and frame injection. It provides a `88XXau' kernel module that…

rtl8821ce-linux-module 0.0.0-5.dce62b9

This is Realtek's RTL8821CE Linux driver for wireless network adapters. …

rtmidi 4.0.0

RtMidi is a set of C++ classes (RtMidiIn, RtMidiOut, and API specific classes) that provide a common cross-platform API for realtime MIDI input/output. …

rtmpdump 2.4-0.c5f04a5

RTMPdump is a toolkit for RTMP streams. All forms of RTMP are supported, including rtmp://, rtmpt://, rtmpe://, rtmpte://, and rtmps://. …

rtorrent 0.9.8

rTorrent is a BitTorrent client with an ncurses interface. It supports full encryption, DHT, PEX, and Magnet Links. It can also be controlled via XML-RPC over SCGI. …

rtss 0.6.2

`rtss' annotates its output with relative durations between consecutive lines and since program start. …

rttr 0.9.6

RTTR stands for Run Time Type Reflection. It describes the ability of a computer program to introspect and modify an object at runtime. It is also the name of the…

rtv 1.27.0

RTV provides a text-based interface to view and interact with Reddit. …

rubber 1.5.1

Rubber is a program whose purpose is to handle all tasks related to the compilation of LaTeX documents. This includes compiling the document itself, of course, enough times so that all…

rubberband 1.8.2

Rubber Band is a library and utility program that permits changing the tempo and pitch of an audio recording independently of one another. …

ruby 3.0.2

Ruby is a dynamic object-oriented programming language with a focus on simplicity and productivity. …

ruby 2.7.4

Ruby is a dynamic object-oriented programming language with a focus on simplicity and productivity. …

ruby 2.4.10

Ruby is a dynamic object-oriented programming language with a focus on simplicity and productivity. …

ruby 2.6.5

Ruby is a dynamic object-oriented programming language with a focus on simplicity and productivity. …

ruby 3.1.1

Ruby is a dynamic object-oriented programming language with a focus on simplicity and productivity. …

ruby 2.5.9

Ruby is a dynamic object-oriented programming language with a focus on simplicity and productivity. …

ruby-actioncable 6.1.3

Action Cable integrates WebSockets with Rails applications. Through WebSockets it allows for real-time features in web applications. …

ruby-actionmailbox 6.1.3

ActionMailbox receives and processes incoming emails in Rails applications. …

ruby-actionmailer 6.1.3

Compose, deliver, receive, and test emails using the controller/view pattern. Including support for multipart email and attachments. …

ruby-actionpack 6.1.3

ActionPack provides conventions for building and testing MVC web applications. These work with any Rack-compatible server. …

ruby-actiontext 6.1.3

ActionText edits and displays rich text in Rails applications. …

ruby-actionview 6.1.3

ActionView provides conventions and helpers for building web pages in Ruby. …

ruby-activejob 6.1.3

ActiveJob allows declaring job classes in a common way across Rails applications. …

ruby-activemodel 6.1.3

This package provides a toolkit for building modeling frameworks like Active Record. ActiveSupport handles attributes, callbacks, validations, serialization, internationalization, and testing. …

ruby-activerecord 6.1.3

Active Record connects classes to relational database table to establish an almost zero-configuration persistence layer for applications. …

ruby-activestorage 6.1.3

ActiveStorage integrates file storage services with Rails applications, allowing files to be attached to ActiveRecord models. …

ruby-activesupport 6.1.3

ActiveSupport is a toolkit of support libraries and Ruby core extensions extracted from the Rails framework. It includes support for multibyte strings, internationalization, time zones, and testing. …

ruby-addressable 2.7.0

Addressable is a replacement for the URI implementation that is part of Ruby's standard library. It more closely conforms to RFC 3986, RFC 3987, and RFC 6570 (level 4), providing support…

ruby-ae 1.8.2

Assertive Expressive (AE) is an assertions library specifically designed for reuse by other test frameworks. …

ruby-afm 0.2.2

This library provides methods to read "Adobe Font Metrics" (afm) files and use the data therein. …

ruby-ansi 1.5.0

This package is a collection of ANSI escape code related libraries enabling ANSI colorization and stylization of console output. Included in the library are the `Code' module, which defines ANSI codes…

ruby-arel 9.0.0

Arel is an SQL "Abstract Syntax Tree" (AST) manager for Ruby. It simplifies the generation of complex SQL queries and adapts to various relational database implementations. …

ruby-aruba 0.14.14

Aruba is an extension for Cucumber, RSpec and Minitest for testing command-line applications. It supports applications written in any language. …

ruby-ascii85 1.0.3

This library provides methods to encode and decode Ascii85 binary-to-text encoding. The main modern use of Ascii85 is in PostScript and "Portable Document Format" (PDF) file formats. …

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