Packages — R (Page 19 of 51)

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r-wmtsa 2.0-3

This package provides software to accompany the book "Wavelet Methods for Time Series Analysis", Donald B. Percival and Andrew T. Walden, Cambridge University Press, 2000. …

r-wordcloud 2.6

This package provides functionality to create pretty word clouds, visualize differences and similarity between documents, and avoid over-plotting in scatter plots with text. …

r-workflows 0.2.3

A workflow is an object that can bundle together your pre-processing, modeling, and post-processing requests. For example, if you have a `recipe' and `parsnip' model, these can be combined into a…

r-workflowsets 0.1.0

A workflow is a combination of a model and preprocessors (e.g, a formula, recipe, etc.). In order to try different combinations of these, an object can be created that contains many…

r-wrench 1.10.0

Wrench is a package for normalization sparse genomic count data, like that arising from 16s metagenomic surveys. …

r-writexl 1.4.0

This package provides a data frame to xlsx exporter based on libxlsxwriter. …

r-xbioc 0.1.16-1.6ff0670

This package provides extra utility functions to perform common tasks in the analysis of omics data, leveraging and enhancing features provided by Bioconductor packages. …

r-xbseq 1.22.0

XBSeq is a novel algorithm for testing RNA-seq "differential expression" (DE), where a statistical model was established based on the assumption that observed signals are the convolution of true expression signals and…

r-xcms 3.14.1

This package provides a framework for processing and visualization of chromatographically separated and single-spectra mass spectral data. It imports from AIA/ANDI NetCDF, mzXML, mzData and mzML files. It preprocesses data…

r-xfun 0.26

This package provides miscellaneous functions commonly used in other packages maintained by Yihui Xie. …

r-xgboost 1.4.1.1

This package provides an R interface to Extreme Gradient Boosting, which is an efficient implementation of the gradient boosting framework from Chen and Guestrin (2016). The package includes efficient linear model…

r-xkcd 0.0.6

This package provides the means to plot ggplot2 graphs in the style of the XKCD web comic. …

r-xmisc 0.2.1

This package provides Xiaobei's miscellaneous classes and functions, which are useful when developing R packages for "object oriented programming" (OOP) using R Reference Class. …

r-xml 3.99-0.8

Many approaches for both reading and creating XML (and HTML) documents (including DTDs), both local and accessible via HTTP or FTP. Also offers access to an XPath "interpreter". …

r-xml2 1.3.2

This package provides a simple, consistent interface to working with XML files in R. It is built on top of the libxml2 C library. …

r-xmlparsedata 1.0.5

This package provides tools to convert the output of `utils::getParseData()' to an `XML' tree, that one can search via `XPath', and is easier to manipulate in general. …

r-xnomial 1.0.4

This package provides an exact Goodness-of-Fit test for multinomial data with fixed probabilities. It can be used to determine whether a set of counts fits a given expected ratio. To…

r-xopen 1.0.0

This package provides a cross-platform solution to open files, directories or URLs with their associated programs. …

r-xtable 1.8-4

This package provides tools to export R data as LaTeX and HTML tables. …

r-xts 0.12.1

This package provides for uniform handling of R's different time-based data classes by extending `zoo', maximizing native format information preservation and allowing for user-level customization and extension, while simplifying cross-class interoperability. …

r-xvector 0.32.0

This package provides memory efficient S4 classes for storing sequences "externally" (behind an R external pointer, or on disk). …

r-xyz 0.2

High dimensional interaction search by brute force requires a quadratic computational cost in the number of variables. The xyz algorithm provably finds strong interactions in almost linear time. For details…

r-yaml 2.2.1

This package implements the libyaml YAML 1.1 parser and emitter (http://pyyaml.org/wiki/LibYAML) for R. …

r-yamss 1.18.0

This package provides tools to analyze and visualize high-throughput metabolomics data acquired using chromatography-mass spectrometry. These tools preprocess data in a way that enables reliable and powerful differential analysis. …

r-yapsa 1.18.0

This package provides functions and routines useful in the analysis of somatic signatures (cf. L. Alexandrov et al., Nature 2013). In particular, functions to perform a signature analysis with…

r-yaqcaffy 1.50.0

This is a package that can be used for quality control of Affymetrix GeneChip expression data and reproducibility analysis of human whole genome chips with the MAQC reference datasets. …

r-yardstick 0.0.8

This package provides tidy tools for quantifying how well a model fits to a data set such as confusion matrices, class probability curve summaries, and regression metrics (e.g., RMSE). …

r-yarn 1.18.0

Expedite large RNA-Seq analyses using a combination of previously developed tools. YARN is meant to make it easier for the user in performing basic mis-annotation quality control, filtering, and condition-aware normalization. YARN…

r-yulab-utils 0.0.2

Miscellaneous functions commonly used by YuLab-SMU, such as `install_zip_gh' to install R packages from Github ZIP files. …

r-zeallot 0.1.0

This package provides a `%<-%' operator to perform multiple, unpacking, and destructuring assignment in R. The operator unpacks the right-hand side of an assignment into multiple values and assigns these values…

r-zfpkm 1.14.0

This is a package to perform the zFPKM transform on RNA-seq FPKM data. This algorithm is based on the publication by Hart et al., 2013 (Pubmed ID 24215113). …

r-zim 1.1.0

Analyze count time series with excess zeros. Two types of statistical models are supported: Markov regression and state-space models. They are also known as observation-driven and parameter-driven models respectively in…

r-zinbwave 1.14.2

This package implements a general and flexible zero-inflated negative binomial model that can be used to provide a low-dimensional representations of single-cell RNA-seq data. The model accounts for zero inflation (dropouts), over-dispersion,…

r-zip 2.2.0

This package provides a cross-platform Zip compression library for R. It is a replacement for the `zip' function, that does not require any additional external tools on any platform. …

r-zlibbioc 1.38.0

This package uses the source code of zlib-1.2.5 to create libraries for systems that do not have these available via other means. …

r-zoib 1.5.5

This package lets you fit beta regression and zero-or-one inflated beta regression and obtain Bayesian inference of the model via the Markov Chain Monte Carlo approach implemented in JAGS. …

r-zoltr 0.5.1

Zoltar is a website that provides a repository of model forecast results in a standardized format and a central location. It supports storing, retrieving, comparing, and analyzing time series forecasts for…

r-zonator 0.6.0

Create new analysis setups and deal with results of Zonation conservation prioritization software. …

r-zonebuilder 0.0.2

This package provides functions, documentation and example data to help divide geographic space into discrete polygons (zones). The functions are motivated by research into the merits of different zoning systems. …

r-zoo 1.8-9

This package contains an S3 class with methods for totally ordered indexed observations. It is particularly aimed at irregular time series of numeric vectors/matrices and factors. …

r-zooarch 1.2

The analysis and inference of faunal remains recovered from archaeological sites concerns the field of zooarchaeology. The zooaRch package provides analytical tools to make inferences on zooarchaeological data. Functions in…

r-zooimage 5.5.2

This package provides a solution for analyzing digital images of plankton. In combination with ImageJ, an image analysis system, it processes digital images, measures individuals, trains for automatic classification of taxa,…

r-zoolog 0.4.1

This package includes functions and reference data to generate and manipulate log-ratios (also known as "log size index" (LSI) values) from measurements obtained on zooarchaeological material. Log ratios are used to…

r-zoom 2.0.4

This package provides `zm', a utility that allows you to zoom/navigate any plot when called with any active plot. …

r-zoomgroupstats 0.1.0

This package provides utilities for processing and analyzing the files that are exported from a recorded Zoom meeting. This includes analyzing data captured through video cameras and microphones, the text-based chat,…

r-zoon 0.6.5

This package reads user submitted modules from an online repository, runs full species distribution modelling workflows and returns output that is fully reproducible. …

r-zra 0.2

This package combines a forecast of a time series, using the function `forecast', with the dynamic plots from `dygraphs'. …

r-zscorer 0.3.1

This package provides a tool for calculating z-scores and centiles for weight-for-age, length/height-for-age, weight-for-length/height, BMI-for-age, head circumference-for-age, age circumference-for-age, subscapular skinfold-for-age, triceps skinfold-for-age based on the WHO Child Growth Standards. …

r-zseq 0.2.0

This package generates well-known integer sequences. The `gmp' package is adopted for computing with arbitrarily large numbers. Every function has a hyperlink to its corresponding item in the "On-Line Encyclopedia…

r-ztable 0.2.2

This package provides functions to make zebra-striped tables (tables with alternating row colors) in LaTeX and HTML formats easily from `data.frame', `matrix', `lm', `aov', `anova', `glm', `coxph', `nls', `fitdistr', `mytable' and `cbind.mytable' objects. …

r-ztpln 0.1.1

This package provides functions for obtaining the density, random variates and maximum likelihood estimates of the Zero-truncated Poisson lognormal distribution and their mixture distribution. …

r-ztree 1.0.6

This package provides tools for reading `.xls' and `.sbj' files which are written by the proprietary program z-Tree for developing and carrying out economic experiments. …

r-ztype 0.1.0

How fast can you type R functions on your keyboard? Find out by running a `zty.pe' game: export R functions as instructions to type to destroy opponents' vessels. …

r-zvcv 2.1.1

"Zero-variance control variates" (ZV-CV) is a post-processing method to reduce the variance of Monte Carlo estimators of expectations using the derivatives of the log target. Once the derivatives are available, the…

r-zyp 0.10-1.1

This package contains an efficient implementation of Sen's slope method (Sen, 1968) plus implementation of Xuebin Zhang's (Zhang, 1999) and Yue-Pilon's (Yue, 2002) pre-whitening approaches to determining trends in climate data. …

r-zzlite 0.1.2

This package provides a minor collection of HTTP wrappers for the Zamzar file conversion API. The wrappers makes it easy to utilize the API and thus convert between more than 100…

racket 8.2

Racket is a general-purpose programming language in the Scheme family, with a large set of libraries and a compiler based on Chez Scheme. Racket is also a platform for language-oriented programming,…

racket-minimal 8.2

Racket is a general-purpose programming language in the Scheme family, with a large set of libraries and a compiler based on Chez Scheme. Racket is also a platform for language-oriented programming,…

radare2 5.0.0

Radare2 is a complete framework for reverse-engineering, debugging, and analyzing binaries. It is composed of a set of small utilities that can be used together or independently from the command line. Radare2…

radare2 5.1.1

Radare2 is a complete framework for reverse-engineering, debugging, and analyzing binaries. It is composed of a set of small utilities that can be used together or independently from the command line. Radare2…

radeontop 1.3

RadeonTop monitors resource consumption on supported AMD Radeon Graphics Processing Units (GPUs), either in real time as bar graphs on a terminal or saved to a file for further processing. It…

radicale 3.0.6

Radicale is a CalDAV and CardDAV server for UNIX-like platforms. Calendars and address books are available for both local and remote access, possibly limited through authentication policies. They can be…

radvd 2.19

The Router Advertisement Daemon (radvd) is run on systems acting as IPv6 routers. It sends Router Advertisement messages specified by RFC 2461 periodically and when requested by a node sending a…

rage 0.3.1

Rage is a video and audio player written with Enlightenment Foundation Libraries with some extra bells and whistles. …

ragel 6.10

Ragel compiles executable finite state machines from regular languages. Ragel targets C, C++, Obj-C, C#, D, Java, Go and Ruby. Ragel state machines can not only recognize byte sequences as…

raincat 1.2.1

Project Raincat is a game developed by Carnegie Mellon students through GCS during the Fall 2008 semester. Raincat features game play inspired from classics Lemmings and The Incredible Machine. The…

rakarrack 0.6.1

Rakarrack is a richly featured multi-effects processor emulating a guitar effects pedalboard. Effects include compressor, expander, noise gate, equalizers, exciter, flangers, chorus, various delay and reverb effects, distortion modules and many more.…

rakudo 2019.03.1

Rakudo Perl is a compiler that implements the Perl 6 specification and runs on top of several virtual machines. …

randomjungle 2.1.0

Random Jungle is an implementation of Random Forests. It is supposed to analyse high dimensional data. In genetics, it can be used for analysing big Genome Wide Association (GWA) data.…

range-v3 0.11.0

Range-v3 is an extension of the Standard Template Library that makes its iterators and algorithms more powerful by making them composable. Unlike other range-like solutions which, seek to do away with…

ranger 1.9.3

ranger is a console file manager with Vi key bindings. It provides a minimalistic and nice curses interface with a view on the directory hierarchy. It ships with `rifle', a file…

rapicorn 16.0.0

Rapicorn is a toolkit for rapid development of user interfaces in C++ and Python. The user interface is designed in a declarative markup language and is connected to the programming logic…

rapid-photo-downloader 0.9.18

Import photos and videos from cameras, phones and memory cards and generate meaningful file and folder names. …

rapidjson 1.1.0

RapidJSON is a fast JSON parser/generator for C++ with both SAX/DOM style API. …

raptor2 2.0.15

Raptor is a C library providing a set of parsers and serialisers that generate Resource Description Framework (RDF) triples by parsing syntaxes or serialise the triples into a syntax. The supported…

rasdaemon 0.6.7

The `rasdaemon' daemon monitors platform RAS (Reliability Availability and Serviceability) reports from Linux kernel trace events. These trace events are logged in `/sys/kernel/debug/tracing' and reported through standard log mechanisms like syslog. …

raspi-arm-chainloader 0.1

This package provides a bootloader for the ARM part of a Raspberry Pi. Note: It does not work on Raspberry Pi 1. …

raspi-arm64-chainloader 0.1

This package provides a bootloader for the ARM part of a Raspberry Pi. Note: It does not work on Raspberry Pi 1. …

rasqal 0.9.33

Rasqal is a C library that handles Resource Description Framework (RDF) query language syntaxes, query construction and execution of queries returning results as bindings, boolean, RDF graphs/triples or syntaxes. The supported…

ratpoints 2.1.3

Ratpoints tries to find all rational points within a given height bound on a hyperelliptic curve in a very efficient way, by using an optimized quadratic sieve algorithm. …

ratpoison 1.4.9

Ratpoison is a simple window manager with no fat library dependencies, no fancy graphics, no window decorations, and no rodent dependence. It is largely modelled after GNU Screen which has done…

raul 0.8.0

Raul (Real-time Audio Utility Library) is a C++ utility library primarily aimed at audio/musical applications. …

raul 0.8.9-1.4db870b2b

Raul (Real-time Audio Utility Library) is a C++ utility library primarily aimed at audio/musical applications. …

rav1e 0.4.1

`rav1e' is an AV1 video encoder. It is designed to eventually cover all use cases, though in its current form it is most suitable for cases where libaom (the reference encoder)…

rawdog 2.23

`rawdog' is a feed aggregator, capable of producing a personal "river of news" or a public "planet" page. It supports all common feed formats, including all versions of RSS and Atom. …

rawtherapee 5.8

RawTherapee is a raw image processing suite. It comprises a subset of image editing operations specifically aimed at non-destructive raw photo post-production and is primarily focused on improving a photographer's workflow by…

raxml 8.2.12

RAxML is a tool for phylogenetic analysis and post-analysis of large phylogenies. …

rbldnsd 0.998b

This package contains a small DNS daemon especially made to handle queries of DNSBL (DNS blocklists), a simple way to publish IP addresses and/or (domain) names which are somehow notable. Such…

rc 1.7.4

This is a reimplementation by Byron Rakitzis of the Plan 9 shell. It has a small feature set similar to a traditional Bourne shell. …

rcas-web 0.1.0

This package provides a simple web interface for the "RNA-centric annotation system" (RCAS). …

rclone 1.52.3

`Rclone' is a command line program to sync files and directories to and from different cloud storage providers. Features include: * MD5/SHA1 hashes checked at all times for file integrity …

rcm 1.3.4

The rcm suite of tools is for managing dotfiles directories. This is a directory containing all the `.*rc' files in your home directory (`.zshrc', `.vimrc', and so on). These files…

rcs 5.10.0

RCS is the original Revision Control System. It works on a file-by-file basis, in contrast to subsequent version control systems such as CVS, Subversion, and Git. This can make it…

rct 0.0.0-2.b3e6f41

Rct is a set of C++ tools that provide nicer (more Qt-like) APIs on top of Standard Template Library ("STL") classes. …

rdesktop 1.9.0

rdesktop is a client for Microsoft's Windows Remote Desktop Services, capable of natively speaking Remote Desktop Protocol (RDP). It allows users to remotely control a user's Windows desktop. …

rdiff-backup 2.0.5

Rdiff-backup backs up one directory to another, possibly over a network. The target directory ends up a copy of the source directory, but extra reverse diffs are stored in a special…

rdma-core 33.1

This package provides userspace components for the InfiniBand subsystem of the Linux kernel. Specifically it contains userspace libraries for the following device nodes: 1. `/dev/infiniband/uverbsX' (`libibverbs') 2. `/dev/infiniband/rdma_cm' (`librdmacm') …

rdmd 2.077.1

rdmd is a companion to the dmd compiler that simplifies the typical edit-compile-link-run or edit-make-run cycle to a rapid edit-run cycle. Like make and other tools, rdmd uses the relative dates…

rdup 1.1.15

Rdup is a utility inspired by rsync and the plan9 way of doing backups. Rdup itself does not backup anything, it only print a list of absolute file names to standard…

re2 2020-11-01

RE2 is a fast, safe, thread-friendly alternative to backtracking regular expression engines like those used in PCRE, Perl and Python. It is a C++ library. …

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0-9 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z